Senior Consultant, Medical Genetics, Artemis Hospitals, Gurgaon, India
Part 4 of 12 in Finding Answers in Recurrent Pregnancy Loss
Single-Gene Causes: Why Second-Trimester Losses Need a Different Genetic Workup
June 7, 2026
While first-trimester loss points investigators toward chromosomal causes, a recurring structural finding on ultrasound in the second trimester (arthrogryposis, or fetal akinesia; polyhydramnios; recurrent hydrops fetalis; recurrent renal anomalies; or repeatedly short long bones) should prompt consideration of a single-gene cause instead. In cases of stillbirth or sudden intrauterine death, long QT syndrome or another cardiac arrhythmia may also be at play.
Whether the condition is autosomal dominant, autosomal recessive, or X-linked determines both the inheritance pattern and the recurrence risk for future pregnancies. Dr. Singh notes sickle cell disease as a familiar example of an autosomal recessive condition, where unaffected carrier parents face a 25% chance per pregnancy of an affected child. Some women are also now known to carry gene variants specifically linked to uterine receptivity or embryo implantation failure, which independently predispose to recurrent loss.
This guide is based on a live Jivo Masterclass — Dr. Kanika Singh taught doctors across Africa on June 7, 2026.
FROM THE LIVE Q&A
Dr. Agbogus Stanley
For patients with PCOS, how long should metformin be taken before conception and after conception?
Dr. Kanika Singh
Metformin should be started at least 2 to 3 months before conception. It is safe to continue in pregnancy and is generally continued through the first trimester and sometimes beyond. It should be monitored with GTT as well as regular HbA1c and blood sugar checks throughout.
Frequently Asked Questions
My question is about sperm collection. In my clinic I often see couples where the male is over 50 years old. What are the chances of getting good quality sperm, and what are the implications for implantation?▼
I will not be able to give you details about specific sperm selection procedures, as in our hospital this is a multidisciplinary process involving the IVF specialist and the andrology laboratory. But in terms of the genetic implications: above the age of 50, there is a high chance that sperm quality is reduced, and the sperm DNA fragmentation index is likely to be elevated. Unless we specifically test for it, we do not know the exact level, but even without testing, there is a significant chance that sperm DNA quality is impaired, which can result in recurrent pregnancy loss or implantation failure. Testing the sperm DNA fragmentation index in men above 50 with a history of recurrent pregnancy loss or implantation failure would be worthwhile.
For patients with PCOS, how long should metformin be taken before conception and after conception?▼
Metformin should be started at least 2 to 3 months before conception. It is safe to continue in pregnancy and is generally continued through the first trimester and sometimes beyond. It should be monitored with GTT as well as regular HbA1c and blood sugar checks throughout.
When should a single-gene cause be suspected in recurrent pregnancy loss?▼
A recurring structural finding on ultrasound in the second trimester should prompt consideration of a single-gene cause rather than a chromosomal one.
Which ultrasound findings point toward a single-gene cause?▼
Arthrogryposis or fetal akinesia, polyhydramnios, recurrent hydrops fetalis, recurrent renal anomalies, or repeatedly short long bones.
What might explain a stillbirth or sudden intrauterine death?▼
Long QT syndrome or another cardiac arrhythmia may be at play in cases of stillbirth or sudden intrauterine death.
How does the inheritance pattern affect recurrence risk?▼
Whether a condition is autosomal dominant, autosomal recessive, or X-linked determines both the inheritance pattern and the recurrence risk; sickle cell disease is an example of an autosomal recessive condition, where unaffected carrier parents face a 25% chance per pregnancy of an affected child.
Can a woman's own genetics cause recurrent pregnancy loss without a fetal abnormality?▼
Some women carry gene variants specifically linked to uterine receptivity or embryo implantation failure, which independently predispose to recurrent loss.
In This Series: Finding Answers in Recurrent Pregnancy Loss
- 1.Finding Answers in Recurrent Pregnancy Loss
- 2.Fetal Chromosomal Abnormalities: The Leading Cause of First-Trimester Loss
- 3.Balanced Translocation: When a Genetically Normal Parent Passes on Recurrent Loss
- 4.Single-Gene Causes: Why Second-Trimester Losses Need a Different Genetic Workup
- 5.Anatomical Causes: Uterine Septum, Fibroids, and Cervical Incompetence
- 6.Antiphospholipid Antibody Syndrome: Diagnosis and Treatment
- 7.Endocrine Causes: Thyroid, PCOS, and Diabetes in Recurrent Pregnancy Loss
- 8.Sperm DNA Fragmentation: The Male Factor in Recurrent Pregnancy Loss
- 9.The Immunological Debate: NK Cells, TNF-Alpha, and IVIG Therapy
- 10.What to Test For: A Practical Investigation Framework by Trimester
- 11.Pre-Implantation Genetic Testing: PGT-A, PGT-M, PGT-SR and PGT-HLA Explained
- 12.Prognosis After Recurrent Pregnancy Loss: Why the Outlook Is Better Than Most Couples Expect